Detailed information of OS493_022728-T1 in Lophelia pertusa

Genomic Location: scaffold_96:752296...763991
NR annotation: KAJ7330206.1, Nucleoporin Nup37 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9CWU9Nucleoporin Nup37 OS=Mus musculus OX=10090 GN=Nup37 PE=1 SV=2
Q8NFH4Nucleoporin Nup37 OS=Homo sapiens OX=9606 GN=NUP37 PE=1 SV=1
Q9VBU8Nucleoporin Nup37 OS=Drosophila melanogaster OX=7227 GN=Nup37 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR037626FamilyNucleoporin Nup37Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22806NUCLEOPORIN NUP37 P37 -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0031080Cellular Componentnuclear pore outer ringInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14302NUP37; nuclear pore complex protein Nup37-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_022728-T1 global co-expression network
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