Detailed information of OS493_022721-T1 in Lophelia pertusa

Genomic Location: scaffold_96:677715...678116
NR annotation: KAJ7330200.1, helix loop helix domain [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M0QWB7Achaete-scute homolog 5 OS=Mus musculus OX=10090 GN=Ascl5 PE=1 SV=1
Q6XD76Achaete-scute homolog 4 OS=Homo sapiens OX=9606 GN=ASCL4 PE=1 SV=1
Q9NQ33Achaete-scute homolog 3 OS=Homo sapiens OX=9606 GN=ASCL3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09067ASCL; achaete-scute complex protein-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_022721-T1 global co-expression network
TOP