Detailed information of OS493_022714-T1 in Lophelia pertusa

Genomic Location: scaffold_96:564380...565799
NR annotation: KAJ7330193.1, Achaete-scute bHLH transcription factor 5 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q90259Achaete-scute homolog 1a OS=Danio rerio OX=7955 GN=ascl1a PE=2 SV=1
Q06234Achaete-scute homolog 1 OS=Xenopus laevis OX=8355 GN=ascl1 PE=2 SV=1
Q02067Achaete-scute homolog 1 OS=Mus musculus OX=10090 GN=Ascl1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036638Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR011598DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR050283FamilyE-box Binding Transcriptional RegulatorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23349BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWISTInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000977Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0032502Biological Processdevelopmental processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09067ASCL; achaete-scute complex protein-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_022714-T1 global co-expression network
TOP