Detailed information of OS493_022701-T1 in Lophelia pertusa

Genomic Location: scaffold_96:205219...221647
NR annotation: KAJ7330181.1, extracellular matrix constituent secretion [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8BH52Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Mus musculus OX=10090 GN=Creb3l2 PE=1 SV=1
Q6QDP7Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Rattus norvegicus OX=10116 GN=Creb3l2 PE=2 SV=1
Q5RCM9Cyclic AMP-responsive element-binding protein 3-like protein 2 OS=Pongo abelii OX=9601 GN=CREB3L2 PE=2 SV=1
 Gene family
Gene familySubfamily
Transcription Factors FamilyTF_bZIP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF00170bZIP_1bZIP transcription factorCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR027430Binding_siteVisual pigments (opsins) retinal binding siteInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46004CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0035497Molecular FunctioncAMP response element bindingInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

Expression pattern
 Expression trend for OS493_022701-T1 global co-expression network
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