Detailed information of OS493_022388-T1 in Lophelia pertusa

Genomic Location: scaffold_91:1104203...1111020
NR annotation: KAJ7390829.1, Metastasis-associated protein mta1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O94776Metastasis-associated protein MTA2 OS=Homo sapiens OX=9606 GN=MTA2 PE=1 SV=1
Q9R190Metastasis-associated protein MTA2 OS=Mus musculus OX=10090 GN=Mta2 PE=1 SV=1
Q9BTC8Metastasis-associated protein MTA3 OS=Homo sapiens OX=9606 GN=MTA3 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01448ELM2ELM2 domainFamilyInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF17226MTA_R1MTA R1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040138FamilyMesoderm induction early response protein/metastasis-associated proteinInterproscan
IPR000949DomainELM2 domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR000679DomainZinc finger, GATA-typeInterproscan
IPR035170DomainMetastasis-associated protein MTA1, R1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10865METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016581Cellular ComponentNuRD complexInterproscan
GO:0042826Molecular Functionhistone deacetylase bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

Expression pattern
 Expression trend for OS493_022388-T1 global co-expression network
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