Detailed information of OS493_022336-T1 in Lophelia pertusa

Genomic Location: scaffold_91:521177...546247
NR annotation: KAJ7390778.1, Ubiquitin carboxyl-terminal hydrolase 34 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q70CQ2Ubiquitin carboxyl-terminal hydrolase 34 OS=Homo sapiens OX=9606 GN=USP34 PE=1 SV=2
Q6ZQ93Ubiquitin carboxyl-terminal hydrolase 34 OS=Mus musculus OX=10090 GN=Usp34 PE=1 SV=3
Q9VC56Ubiquitin carboxyl-terminal hydrolase puf OS=Drosophila melanogaster OX=7227 GN=puf PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12030DUF3517Domain of unknown function (DUF3517)FamilyInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021905DomainUbiquitin C-terminal hydrolase-like, DUF3517Interproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24169THADA, ARMC13; thyroid adenoma-associated protein-Domain-containing proteins not elsewhere classifiedko04990deepkoala

Expression pattern
 Expression trend for OS493_022336-T1 global co-expression network
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