Detailed information of OS493_022336-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_022336-T1UBIQUITIN CARBOXYL-TERMINAL HYDROLASEscaffold_91521177546247+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF12030DUF3517Domain of unknown function (DUF3517)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR018200Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR021905DomainUbiquitin C-terminal hydrolase-like, DUF3517Interproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR050164FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_022336-T1 global RNA-seq network
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