Gene detail

Detailed information of OS493_021708-T1 in Lophelia pertusa

Genomic Location: scaffold_84:1023407...1025492
NR annotation: KAJ7330778.1, transcription factor TFIIIB subunit brf1 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q8CFK2	Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 SV=1
Q92994	Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV=1
P29056	Transcription factor IIIB 70 kDa subunit OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=BRF1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08271	TF_Zn_Ribbon	TFIIB zinc-binding	Domain	Interproscan
PF00382	TFIIB	Transcription factor TFIIB repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013137	Domain	Zinc finger, TFIIB-type	Interproscan
IPR000812	Family	Transcription factor TFIIB	Interproscan
IPR036915	Homologous_superfamily	Cyclin-like superfamily	Interproscan
IPR013150	Domain	Transcription factor TFIIB, cyclin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11618	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000126	Cellular Component	transcription factor TFIIIB complex	Interproscan
GO:0000995	Molecular Function	RNA polymerase III general transcription initiation factor activity	Interproscan
GO:0001006	Molecular Function	RNA polymerase III type 3 promoter sequence-specific DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006352	Biological Process	DNA-templated transcription initiation	Interproscan
GO:0006383	Biological Process	transcription by RNA polymerase III	Interproscan
GO:0070897	Biological Process	transcription preinitiation complex assembly	Interproscan
GO:0097550	Cellular Component	transcription preinitiation complex	Interproscan
GO:0017025	Molecular Function	TBP-class protein binding	Interproscan

Expression pattern