Detailed information of OS493_021707-T1 in Lophelia pertusa

Genomic Location: scaffold_84:1016021...1022951
NR annotation: KAJ7330777.1, transcription factor TFIIIB subunit brf1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92994Transcription factor IIIB 90 kDa subunit OS=Homo sapiens OX=9606 GN=BRF1 PE=1 SV=1
Q8CFK2Transcription factor IIIB 90 kDa subunit OS=Mus musculus OX=10090 GN=Brf1 PE=1 SV=1
Q9P6R0Transcription factor IIIB 60 kDa subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=brf1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00382TFIIBTranscription factor TFIIB repeatDomainInterproscan
PF07741BRF1Brf1-like TBP-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036915Homologous_superfamilyCyclin-like superfamilyInterproscan
IPR013150DomainTranscription factor TFIIB, cyclin-like domainInterproscan
IPR011665DomainBrf1, TBP-binding domainInterproscan
IPR013763DomainCyclin-like domainInterproscan
IPR000812FamilyTranscription factor TFIIBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11618TRANSCRIPTION INITIATION FACTOR IIB-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0017025Molecular FunctionTBP-class protein bindingInterproscan
GO:0000126Cellular Componenttranscription factor TFIIIB complexInterproscan
GO:0000995Molecular FunctionRNA polymerase III general transcription initiation factor activityInterproscan
GO:0001006Molecular FunctionRNA polymerase III type 3 promoter sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006383Biological Processtranscription by RNA polymerase IIIInterproscan
GO:0070897Biological Processtranscription preinitiation complex assemblyInterproscan
GO:0097550Cellular Componenttranscription preinitiation complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15196BRF1, GTF3B; transcription factor IIIB 90 kDa subunit-Transcription machineryko03021deepkoala

Expression pattern
 Expression trend for OS493_021707-T1 global co-expression network
TOP