Detailed information of OS493_021631-T1 in Lophelia pertusa

Genomic Location: scaffold_84:310116...312314
NR annotation: KAJ7330703.1, THUMP domain-containing protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2T9W2tRNA (guanine(6)-N(2))-methyltransferase THUMP3 OS=Bos taurus OX=9913 GN=THUMPD3 PE=2 SV=1
P97770tRNA (guanine(6)-N(2))-methyltransferase THUMP3 OS=Mus musculus OX=10090 GN=Thumpd3 PE=1 SV=1
Q9BV44tRNA (guanine(6)-N(2))-methyltransferase THUMP3 OS=Homo sapiens OX=9606 GN=THUMPD3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02926THUMPTHUMP domainDomainInterproscan
PF01170UPF0020Putative RNA methylase family UPF0020DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004114DomainTHUMP domainInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR000241DomainRibosomal RNA large subunit methyltransferase K/L-like, methyltransferase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14911THUMP DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0016423Molecular FunctiontRNA (guanine) methyltransferase activityInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan

Expression pattern
 Expression trend for OS493_021631-T1 global co-expression network
TOP