Detailed information of OS493_021581-T1 in Lophelia pertusa

Genomic Location: scaffold_83:1028925...1034933
NR annotation: KAJ7358800.1, Protein sidekick-1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7MBJ4Receptor-type tyrosine-protein phosphatase F OS=Bos taurus OX=9913 GN=PTPRF PE=2 SV=1
A2A8L5Receptor-type tyrosine-protein phosphatase F OS=Mus musculus OX=10090 GN=Ptprf PE=1 SV=1
P10586Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens OX=9606 GN=PTPRF PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

Expression pattern
 Expression trend for OS493_021581-T1 global co-expression network
TOP