Detailed information of OS493_021502-T1 in Lophelia pertusa

Genomic Location: scaffold_83:119759...129371
NR annotation: KAJ7358729.1, hypothetical protein OS493_021502, partial [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7MBJ4Receptor-type tyrosine-protein phosphatase F OS=Bos taurus OX=9913 GN=PTPRF PE=2 SV=1
A2A8L5Receptor-type tyrosine-protein phosphatase F OS=Mus musculus OX=10090 GN=Ptprf PE=1 SV=1
P10586Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens OX=9606 GN=PTPRF PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR051622FamilyReceptor-type Tyrosine-protein PhosphatasesInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24051SUSHI DOMAIN-CONTAINING PROTEIN 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_021502-T1 global co-expression network
TOP