Detailed information of OS493_021478-T1 in Lophelia pertusa

Genomic Location: scaffold_82:1362528...1365902
NR annotation: KAJ7372050.1, hypothetical protein OS493_021478 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
F1QEG2Kelch-like protein 41b OS=Danio rerio OX=7955 GN=klhl41b PE=2 SV=1
P02714Acetylcholine receptor subunit gamma OS=Tetronarce californica OX=7787 GN=CHRNG PE=1 SV=1
P30926Neuronal acetylcholine receptor subunit beta-4 OS=Homo sapiens OX=9606 GN=CHRNB4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45632LD33804PInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

Expression pattern
 Expression trend for OS493_021478-T1 global co-expression network
TOP