Detailed information of OS493_021370-T1 in Lophelia pertusa

Genomic Location: scaffold_81:1497484...1508251
NR annotation: KAJ7378783.1, anterior/posterior pattern specification [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q63410Homeobox protein OTX1 OS=Rattus norvegicus OX=10116 GN=Otx1 PE=2 SV=1
Q91813Homeobox protein OTX2-A OS=Xenopus laevis OX=8355 GN=otx2-a PE=1 SV=1
P80205Homeobox protein OTX1 OS=Mus musculus OX=10090 GN=Otx1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45793HOMEOBOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09326OTX1; homeobox protein OTX1-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_021370-T1 global co-expression network
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