Detailed information of OS493_021356-T1 in Lophelia pertusa

Genomic Location: scaffold_81:1382219...1383546
NR annotation: KAJ7378770.1, hypothetical protein OS493_021356 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01753zf-MYNDMYND fingerDomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002893DomainZinc finger, MYND-typeInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR051550FamilySCF Complex Subunits and Alginate EpimerasesInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR039448DomainRight handed beta helix domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22990F-BOX ONLY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

Expression pattern
 Expression trend for OS493_021356-T1 global co-expression network
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