Detailed information of OS493_021324-T1 in Lophelia pertusa

Genomic Location: scaffold_81:1070468...1082767
NR annotation: KAJ7378741.1, tRNA methyltransferase 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8IZ69tRNA (uracil-5-)-methyltransferase homolog A OS=Homo sapiens OX=9606 GN=TRMT2A PE=1 SV=2
Q8BNV1tRNA (uracil-5-)-methyltransferase homolog A OS=Mus musculus OX=10090 GN=Trmt2a PE=1 SV=2
Q96GJ1tRNA (uracil-5-)-methyltransferase homolog B OS=Homo sapiens OX=9606 GN=TRMT2B PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05958tRNA_U5-meth_trtRNA (Uracil-5-)-methyltransferaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010280Family(Uracil-5)-methyltransferase familyInterproscan
IPR030390Active_siteRNA methyltransferase TrmA, active siteInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR045850FamilytRNA (uracil(54)-C(5))-methyltransferase, metazoa typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45904TRNA (URACIL-5-)-METHYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006396Biological ProcessRNA processingInterproscan
GO:0008173Molecular FunctionRNA methyltransferase activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan

Expression pattern
 Expression trend for OS493_021324-T1 global co-expression network
TOP