Detailed information of OS493_021278-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_021278-T1ELONGATION FACTOR TU-RELATEDscaffold_81273835310747-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyZBTB
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF03143GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000210DomainBTB/POZ domainInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR004160DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR004541FamilyTranslation elongation factor EFTu/EF1A, bacterial/organelleInterproscan
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR033720DomainElongation factor Tu, domain 2Interproscan
IPR038648Homologous_superfamilyPHR domain superfamilyInterproscan
IPR041709DomainElongation factor Tu (EF-Tu), GTP-binding domainInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0070125Biological Processmitochondrial translational elongationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_021278-T1 global RNA-seq network
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