Detailed information of OS493_021278-T1 in Lophelia pertusa

Genomic Location: scaffold_81:273835...310747
NR annotation: KAJ7378696.1, hypothetical protein OS493_021278 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0BUQ2Elongation factor Tu OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) OX=391165 GN=tuf PE=3 SV=1
P02992Elongation factor Tu, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TUF1 PE=1 SV=1
Q211E6Elongation factor Tu OS=Rhodopseudomonas palustris (strain BisB18) OX=316056 GN=tuf PE=3 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|BTB

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03144GTP_EFTU_D2Elongation factor Tu domain 2DomainInterproscan
PF00651BTBBTB/POZ domainDomainInterproscan
PF00009GTP_EFTUElongation factor Tu GTP binding domainDomainInterproscan
PF07707BACKBTB And C-terminal KelchDomainInterproscan
PF03143GTP_EFTU_D3Elongation factor Tu C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005225DomainSmall GTP-binding protein domainInterproscan
IPR050055FamilyElongation factor Tu GTPaseInterproscan
IPR011333Homologous_superfamilySKP1/BTB/POZ domain superfamilyInterproscan
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR000795DomainTranslational (tr)-type GTP-binding domainInterproscan
IPR038648Homologous_superfamilyPHR domain superfamilyInterproscan
IPR004161DomainTranslation elongation factor EFTu-like, domain 2Interproscan
IPR041709DomainElongation factor Tu (EF-Tu), GTP-binding domainInterproscan
IPR000210DomainBTB/POZ domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR033720DomainElongation factor Tu, domain 2Interproscan
IPR011705DomainBTB/Kelch-associatedInterproscan
IPR004541FamilyTranslation elongation factor EFTu/EF1A, bacterial/organelleInterproscan
IPR031157Conserved_siteTr-type G domain, conserved siteInterproscan
IPR004160DomainTranslation elongation factor EFTu/EF1A, C-terminalInterproscan
IPR009001Homologous_superfamilyTranslation elongation factor EF1A/initiation factor IF2gamma, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43721ELONGATION FACTOR TU-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0070125Biological Processmitochondrial translational elongationInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

Expression pattern
 Expression trend for OS493_021278-T1 global co-expression network
TOP