Detailed information of OS493_021244-T1 in Lophelia pertusa

Genomic Location: scaffold_80:1437177...1455255
NR annotation: KAJ7384612.1, Fibrillin-1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P35555Fibrillin-1 OS=Homo sapiens OX=9606 GN=FBN1 PE=1 SV=4
P98133Fibrillin-1 OS=Bos taurus OX=9913 GN=FBN1 PE=1 SV=2
Q9TV36Fibrillin-1 OS=Sus scrofa OX=9823 GN=FBN1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF00683TBTB domainFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR036773Homologous_superfamilyTGF-beta binding (TB) domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR017878DomainTB domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR051145FamilyGrowth Arrest-Specific/Sex Hormone-Binding/Vitamin K-DependentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24040LAMININ G-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

Expression pattern
 Expression trend for OS493_021244-T1 global co-expression network
TOP