Detailed information of OS493_021243-T1 in Lophelia pertusa

Genomic Location: scaffold_80:1428081...1434187
NR annotation: KAJ7384611.1, DDB1- and CUL4-associated factor 12 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5T6F0DDB1- and CUL4-associated factor 12 OS=Homo sapiens OX=9606 GN=DCAF12 PE=1 SV=1
Q4R3J7DDB1- and CUL4-associated factor 12 OS=Macaca fascicularis OX=9541 GN=DCAF12 PE=2 SV=1
Q8BGZ3DDB1- and CUL4-associated factor 12 OS=Mus musculus OX=10090 GN=Dcaf12 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR050349FamilyWD repeat LIS1/nudF dynein regulationInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44129WD REPEAT-CONTAINING PROTEIN POP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11803DCAF12; DDB1- and CUL4-associated factor 12-Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_021243-T1 global co-expression network
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