Detailed information of OS493_021227-T1 in Lophelia pertusa

Genomic Location: scaffold_80:1314576...1317030
NR annotation: KAJ7384595.1, transcriptional regulator [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O14646Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens OX=9606 GN=CHD1 PE=1 SV=2
B6ZLK2Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus OX=9031 GN=CHD1 PE=1 SV=1
P40201Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus OX=10090 GN=Chd1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023780DomainChromo domainInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR023779Conserved_siteChromo domain, conserved siteInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45623CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000785Cellular ComponentchromatinInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0034728Biological Processnucleosome organizationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

Expression pattern
 Expression trend for OS493_021227-T1 global co-expression network
TOP