Detailed information of OS493_021085-T1 in Lophelia pertusa

Genomic Location: scaffold_79:1532353...1540543
NR annotation: KAJ7391064.1, General transcription factor IIH subunit 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P32780General transcription factor IIH subunit 1 OS=Homo sapiens OX=9606 GN=GTF2H1 PE=1 SV=1
Q9DBA9General transcription factor IIH subunit 1 OS=Mus musculus OX=10090 GN=Gtf2h1 PE=1 SV=2
Q960E8General transcription factor IIH subunit 1 OS=Drosophila melanogaster OX=7227 GN=Tfb1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03909BSDBSD domain DomainInterproscan
PF08567PH_TFIIHTFIIH p62 subunit, N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005607DomainBSD domainInterproscan
IPR013876DomainTFIIH p62 subunit, N-terminalInterproscan
IPR027079FamilyTFIIH subunit Tfb1/GTF2H1Interproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR035925Homologous_superfamilyBSD domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12856TRANSCRIPTION INITIATION FACTOR IIH-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000439Cellular Componenttranscription factor TFIIH core complexInterproscan
GO:0005675Cellular Componenttranscription factor TFIIH holo complexInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0006360Biological Processtranscription by RNA polymerase IInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0070816Biological Processobsolete phosphorylation of RNA polymerase II C-terminal domainInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03141TFIIH1, GTF2H1, TFB1; transcription initiation factor TFIIH subunit 1-DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_021085-T1 global co-expression network
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