Detailed information of OS493_021037-T1 in Lophelia pertusa

Genomic Location: scaffold_79:1172123...1189182
NR annotation: KAJ7391017.1, hypothetical protein OS493_021037 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y2G1Myelin regulatory factor OS=Homo sapiens OX=9606 GN=MYRF PE=1 SV=3
Q3UR85Myelin regulatory factor OS=Mus musculus OX=10090 GN=Myrf PE=1 SV=2
Q66IV1Myelin regulatory factor OS=Xenopus laevis OX=8355 GN=myrf PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13888MRF_C2Myelin gene regulatory factor C-terminal domain 2DomainInterproscan
PF05224NDT80_PhoGNDT80 / PhoG like DNA-binding familyFamilyInterproscan
PF13884Peptidase_S74Chaperone of endosialidaseDomainInterproscan
PF13887MYRF_ICAMyelin regulatory factor ICA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025719DomainMyelin gene regulatory factor C-terminal domain 2Interproscan
IPR030392DomainIntramolecular chaperone auto-processing domainInterproscan
IPR037141Homologous_superfamilyNDT80 DNA-binding domain superfamilyInterproscan
IPR024061DomainNDT80 DNA-binding domainInterproscan
IPR051577FamilyMyelin Regulatory Factor-likeInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR026932DomainMyelin gene regulatory factor, ICA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13029UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0016540Biological Processprotein autoprocessingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0045893Biological Processpositive regulation of DNA-templated transcriptionInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K24768MYRF; myelin regulatory factorEC:3.4.-.-
Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_021037-T1 global co-expression network
TOP