Genomic Location: scaffold_79:381204...385267
NR annotation: KAJ7390921.1, hypothetical protein OS493_020941 [Desmophyllum pertusum]
| CDS | ||||
| OS493_020941-T1 | ||||
| Transcript |
| OS493_020941-T1 |
| Protein |
| OS493_020941-T1 |
| Uniprot term | Description |
|---|---|
| E7FAM5 | E3 ubiquitin-protein ligase TRIM71 OS=Danio rerio OX=7955 GN=trim71 PE=1 SV=1 |
| Q9H8W5 | E3 ubiquitin-protein ligase TRIM45 OS=Homo sapiens OX=9606 GN=TRIM45 PE=1 SV=2 |
| Q5BIM1 | E3 ubiquitin-protein ligase TRIM45 OS=Bos taurus OX=9913 GN=TRIM45 PE=2 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00643 | zf-B_box | B-box zinc finger | Domain | Interproscan |
| PF00630 | Filamin | Filamin/ABP280 repeat | Domain | Interproscan |
| PF13445 | zf-RING_UBOX | RING-type zinc-finger | Domain | Interproscan |
| PF01436 | NHL | NHL repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001258 | Repeat | NHL repeat | Interproscan |
| IPR000315 | Domain | B-box-type zinc finger | Interproscan |
| IPR047153 | Family | TRIM45/56/19 | Interproscan |
| IPR014756 | Homologous_superfamily | Immunoglobulin E-set | Interproscan |
| IPR011042 | Homologous_superfamily | Six-bladed beta-propeller, TolB-like | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR001298 | Repeat | Filamin/ABP280 repeat | Interproscan |
| IPR013783 | Homologous_superfamily | Immunoglobulin-like fold | Interproscan |
| IPR017868 | Repeat | Filamin/ABP280 repeat-like | Interproscan |
| IPR027370 | Domain | Zinc finger, RING-type, eukaryotic | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR003649 | Domain | B-box, C-terminal | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR25462 | BONUS, ISOFORM C-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| Expression trend for OS493_020941-T1 global co-expression network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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