Detailed information of OS493_020934-T1 in Lophelia pertusa

Genomic Location: scaffold_79:347837...352826
NR annotation: KAJ7390914.1, Endoplasmic reticulum-Golgi intermediate compartment protein 2 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7T2D4Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Danio rerio OX=7955 GN=ergic2 PE=2 SV=1
Q4R5C3Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Macaca fascicularis OX=9541 GN=ERGIC2 PE=2 SV=1
Q96RQ1Endoplasmic reticulum-Golgi intermediate compartment protein 2 OS=Homo sapiens OX=9606 GN=ERGIC2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07970COPIIcoated_ERVEndoplasmic reticulum vesicle transporter FamilyInterproscan
PF13850ERGIC_NEndoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012936DomainEndoplasmic reticulum vesicle transporter, C-terminalInterproscan
IPR039542DomainEndoplasmic reticulum vesicle transporter, N-terminalInterproscan
IPR045888FamilyEndoplasmic reticulum vesicle transporterInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10984ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030134Cellular ComponentCOPII-coated ER to Golgi transport vesicleInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20366ERGIC2, ERV41; endoplasmic reticulum-Golgi intermediate compartment protein 2-Membrane traffickingko04131deepkoala

Expression pattern
 Expression trend for OS493_020934-T1 global co-expression network
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