Detailed information of OS493_020586-T1 in Lophelia pertusa

Genomic Location: scaffold_76:953802...962243
NR annotation: KAJ7372160.1, Coronin-1C [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9WUM4Coronin-1C OS=Mus musculus OX=10090 GN=Coro1c PE=1 SV=2
Q9ULV4Coronin-1C OS=Homo sapiens OX=9606 GN=CORO1C PE=1 SV=1
B0R0D7Coronin-1C-A OS=Danio rerio OX=7955 GN=coro1ca PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08953DUF1899Domain of unknown function (DUF1899)RepeatInterproscan
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan
PF16300WD40_4Type of WD40 repeatRepeatInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015048DomainDomain of unknown function DUF1899Interproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015505FamilyCoroninInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10856CORONINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007015Biological Processactin filament organizationInterproscan
GO:0051015Molecular Functionactin filament bindingInterproscan

Expression pattern
 Expression trend for OS493_020586-T1 global co-expression network
TOP