Detailed information of OS493_020359-T1 in Lophelia pertusa

Genomic Location: scaffold_74:1582637...1584448
NR annotation: KAJ7384767.1, defense response, incompatible interaction [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q38HS2Transforming growth factor beta-1 proprotein OS=Mustela putorius furo OX=9669 GN=TGFB1 PE=2 SV=1
P04202Transforming growth factor beta-1 proprotein OS=Mus musculus OX=10090 GN=Tgfb1 PE=1 SV=1
P17246Transforming growth factor beta-1 proprotein OS=Rattus norvegicus OX=10116 GN=Tgfb1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00019TGF_betaTransforming growth factor beta like domainDomainInterproscan
PF00688TGFb_propeptideTGF-beta propeptideFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029034Homologous_superfamilyCystine-knot cytokineInterproscan
IPR001839DomainTransforming growth factor-beta, C-terminalInterproscan
IPR017948Conserved_siteTransforming growth factor beta, conserved siteInterproscan
IPR001111DomainTGF-beta, propeptideInterproscan
IPR015615FamilyTransforming growth factor-beta-relatedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11848TGF-BETA FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008083Molecular Functiongrowth factor activityInterproscan
GO:0005125Molecular Functioncytokine activityInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0007179Biological Processtransforming growth factor beta receptor signaling pathwayInterproscan
GO:0042127Biological Processregulation of cell population proliferationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13376TGFB2; transforming growth factor beta-2-Glycosaminoglycan binding proteinsko00536deepkoala

Expression pattern
 Expression trend for OS493_020359-T1 global co-expression network
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