Detailed information of OS493_020307-T1 in Lophelia pertusa

Genomic Location: scaffold_74:1116971...1136826
NR annotation: KAJ7384721.1, hypothetical protein OS493_020307 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWY9Mucin-like protein (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q96RW7Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
C0HL12Adhesion G protein-coupled receptor B1 OS=Rattus norvegicus OX=10116 GN=Adgrb1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00431CUBCUB domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000859DomainCUB domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR005533DomainAMOP domainInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR003886DomainNIDO domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007160Biological Processcell-matrix adhesionInterproscan

Expression pattern
 Expression trend for OS493_020307-T1 global co-expression network
TOP