Detailed information of OS493_020301-T1 in Lophelia pertusa

Genomic Location: scaffold_74:1028208...1038956
NR annotation: KAJ7384717.1, Striatin-3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9ERG2Striatin-3 OS=Mus musculus OX=10090 GN=Strn3 PE=1 SV=1
A5D7H2Striatin-3 OS=Bos taurus OX=9913 GN=STRN3 PE=2 SV=1
P58405Striatin-3 OS=Rattus norvegicus OX=10116 GN=Strn3 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR051488FamilyWD repeat-containing striatinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15653STRIATINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17608STRN1_3_4; striatin 1/3/4-Protein phosphatases and associated proteinsko01009deepkoala

Expression pattern
 Expression trend for OS493_020301-T1 global co-expression network
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