Detailed information of OS493_020090-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_020090-T1SOLUTE CARRIER FAMILY 39scaffold_73976440320+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02535ZipZIP Zinc transporterFamilyInterproscan
PF13202EF-hand_5EF handDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002048DomainEF-hand domainInterproscan
IPR003689FamilyZinc/iron permeaseInterproscan
IPR011992Homologous_superfamilyEF-hand domain pairInterproscan
IPR050799FamilyZinc Iron Protein (ZIP) TransporterInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12191SOLUTE CARRIER FAMILY 39Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005385Molecular Functionzinc ion transmembrane transporter activityInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006875Biological Processobsolete intracellular metal ion homeostasisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030001Biological Processmetal ion transportInterproscan
GO:0046873Molecular Functionmetal ion transmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0071578Biological Processzinc ion import across plasma membraneInterproscan
GO:0140410Molecular Functionmonoatomic cation:bicarbonate symporter activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_020090-T1 global RNA-seq network
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