Detailed information of OS493_019983-T1 in Lophelia pertusa

Genomic Location: scaffold_72:57524...62679
NR annotation: KAJ7331203.1, hypothetical protein OS493_019983 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9P202Whirlin OS=Homo sapiens OX=9606 GN=WHRN PE=1 SV=4
Q80VW5Whirlin OS=Mus musculus OX=10090 GN=Whrn PE=1 SV=3
Q810W9Whirlin OS=Rattus norvegicus OX=10116 GN=Whrn PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00595PDZPDZ domainDomainInterproscan
PF17820PDZ_6PDZ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001478DomainPDZ domainInterproscan
IPR041489DomainPDZ domain 6Interproscan
IPR036034Homologous_superfamilyPDZ superfamilyInterproscan
IPR051844FamilySensory Perception USH2 Complex ProteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23116PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0002142Cellular Componentstereocilia ankle link complexInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0032426Cellular Componentstereocilium tipInterproscan

Expression pattern
 Expression trend for OS493_019983-T1 global co-expression network
TOP