Detailed information of OS493_019886-T1 in Lophelia pertusa

Genomic Location: scaffold_71:731734...732715
NR annotation: KAJ7358981.1, hypothetical protein OS493_019886 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Y5I4Protocadherin alpha-C2 OS=Homo sapiens OX=9606 GN=PCDHAC2 PE=1 SV=1
Q5DRE1Protocadherin alpha-C2 OS=Pan troglodytes OX=9598 GN=PCDHAC2 PE=3 SV=1
Q8R508Protocadherin Fat 3 OS=Rattus norvegicus OX=10116 GN=Fat3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028CadherinCadherin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002126DomainCadherin-likeInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR050174FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028CADHERIN-87AInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03016RPABC3, RPB8, POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3-DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_019886-T1 global co-expression network
TOP