Detailed information of OS493_019856-T1 in Lophelia pertusa

Genomic Location: scaffold_71:53854...62827
NR annotation: KAJ7358952.1, hypothetical protein OS493_019856 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13569G/T mismatch-specific thymine DNA glycosylase OS=Homo sapiens OX=9606 GN=TDG PE=1 SV=2
P56581G/T mismatch-specific thymine DNA glycosylase OS=Mus musculus OX=10090 GN=Tdg PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03167UDGUracil DNA glycosylase superfamilyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015637FamilyUracil DNA glycosylase family 2Interproscan
IPR036895Homologous_superfamilyUracil-DNA glycosylase-like domain superfamilyInterproscan
IPR005122DomainUracil-DNA glycosylase-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12159G/T AND G/U MISMATCH-SPECIFIC DNA GLYCOSYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000700Molecular Functionmismatch base pair DNA N-glycosylase activityInterproscan
GO:0004844Molecular Functionuracil DNA N-glycosylase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006285Biological Processbase-excision repair, AP site formationInterproscan
GO:0008263Molecular Functionpyrimidine-specific mismatch base pair DNA N-glycosylase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20813TDG; thymine-DNA glycosylaseEC:3.2.2.29
DNA repair and recombination proteinsko03400deepkoala

Expression pattern
 Expression trend for OS493_019856-T1 global co-expression network
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