Detailed information of OS493_019760-T1 in Lophelia pertusa

Genomic Location: scaffold_70:762287...773607
NR annotation: KAJ7372316.1, Ubiquitin carboxyl-terminal hydrolase 20 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5R5Z6Ubiquitin carboxyl-terminal hydrolase 20 OS=Pongo abelii OX=9601 GN=USP20 PE=2 SV=1
Q9Y2K6Ubiquitin carboxyl-terminal hydrolase 20 OS=Homo sapiens OX=9606 GN=USP20 PE=1 SV=2
A7Z056Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus OX=9913 GN=USP20 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyDUB|USP|USP

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06337DUSPDUSP domainDomainInterproscan
PF00443UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006615DomainPeptidase C19, ubiquitin-specific peptidase, DUSP domainInterproscan
IPR038765Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR035927Homologous_superfamilyDUSP-like superfamilyInterproscan
IPR001394DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889DomainUbiquitin specific protease domainInterproscan
IPR050185FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004843Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11848USP20_33; ubiquitin carboxyl-terminal hydrolase 20/33EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Expression pattern
 Expression trend for OS493_019760-T1 global co-expression network
TOP