Detailed information of OS493_019732-T1 in Lophelia pertusa

Genomic Location: scaffold_70:569523...573464
NR annotation: KAJ7372288.1, hypothetical protein OS493_019732 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W539Hormone receptor 4 OS=Drosophila melanogaster OX=7227 GN=Hr4 PE=1 SV=4
Q07869Peroxisome proliferator-activated receptor alpha OS=Homo sapiens OX=9606 GN=PPARA PE=1 SV=2
Q0GFF6Retinoic acid receptor RXR-gamma OS=Sus scrofa OX=9823 GN=RXRG PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00105zf-C4Zinc finger, C4 type (two domains)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001628DomainZinc finger, nuclear hormone receptor-typeInterproscan
IPR013088Homologous_superfamilyZinc finger, NHR/GATA-typeInterproscan
IPR050200FamilyNuclear hormone receptor family NR3 subfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48092KNIRPS-RELATED PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000790Cellular ComponentchromatinInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan

Expression pattern
 Expression trend for OS493_019732-T1 global co-expression network
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