Detailed information of OS493_019157-T1 in Lophelia pertusa

Genomic Location: scaffold_65:1943053...1968787
NR annotation: KAJ7360065.1, Liprin-alpha-1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13136Liprin-alpha-1 OS=Homo sapiens OX=9606 GN=PPFIA1 PE=1 SV=1
O75334Liprin-alpha-2 OS=Homo sapiens OX=9606 GN=PPFIA2 PE=1 SV=2
Q8BSS9Liprin-alpha-2 OS=Mus musculus OX=10090 GN=Ppfia2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07647SAM_2SAM domain (Sterile alpha motif)DomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037620DomainLiprin-alpha, SAM domain repeat 1Interproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR037622DomainLiprin-alpha, SAM domain repeat 3Interproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR029515FamilyLAR-interacting protein, LiprinInterproscan
IPR037621DomainLiprin-alpha, SAM domain repeat 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12587LAR INTERACTING PROTEIN LIP -RELATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0048786Cellular Componentpresynaptic active zoneInterproscan
GO:0050808Biological Processsynapse organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K26226PPFIA; liprin-alpha-Membrane traffickingko04131deepkoala

Expression pattern
 Expression trend for OS493_019157-T1 global co-expression network
TOP