Detailed information of OS493_019145-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_019145-T1SWI/SNF-RELATEDscaffold_6516715891722542+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyHMG

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan
PF01426BAHBAH domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan
IPR037382FamilyRemodelling complex subunit Rsc/polybromoInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR16062SWI/SNF-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0016586Cellular ComponentRSC-type complexInterproscan
GO:0043044Biological Processchromatin remodelingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_019145-T1 global RNA-seq network
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