Detailed information of OS493_019145-T1 in Lophelia pertusa

Genomic Location: scaffold_65:1671589...1722542
NR annotation: KAJ7360054.1, hypothetical protein OS493_019145 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q86U86Protein polybromo-1 OS=Homo sapiens OX=9606 GN=PBRM1 PE=1 SV=1
Q90941Protein polybromo-1 OS=Gallus gallus OX=9031 GN=PBRM1 PE=1 SV=1
Q8BSQ9Protein polybromo-1 OS=Mus musculus OX=10090 GN=Pbrm1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01426BAHBAH domainDomainInterproscan
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001025DomainBromo adjacent homology (BAH) domainInterproscan
IPR009071DomainHigh mobility group box domainInterproscan
IPR037382FamilyRemodelling complex subunit Rsc/polybromoInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR043151Homologous_superfamilyBromo adjacent homology (BAH) domain superfamilyInterproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16062SWI/SNF-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0016586Cellular ComponentRSC-type complexInterproscan
GO:0043044Biological Processchromatin remodelingInterproscan

Expression pattern
 Expression trend for OS493_019145-T1 global co-expression network
TOP