Detailed information of OS493_019137-T1 in Lophelia pertusa

Genomic Location: scaffold_65:1442316...1451532
NR annotation: KAJ7360046.1, Protein nedd1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8NHV4Protein NEDD1 OS=Homo sapiens OX=9606 GN=NEDD1 PE=1 SV=1
Q3B7M6Protein NEDD1 OS=Bos taurus OX=9913 GN=NEDD1 PE=2 SV=1
P33215Protein NEDD1 OS=Mus musculus OX=10090 GN=Nedd1 PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR052818FamilyNEDD1 Spindle Assembly ProteinInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44414PROTEIN NEDD1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000242Cellular Componentpericentriolar materialInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0000922Cellular Componentspindle poleInterproscan
GO:0005814Cellular ComponentcentrioleInterproscan
GO:0007020Biological Processmicrotubule nucleationInterproscan
GO:0036064Cellular Componentciliary basal bodyInterproscan
GO:0043015Molecular Functiongamma-tubulin bindingInterproscan

Expression pattern
 Expression trend for OS493_019137-T1 global co-expression network
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