Detailed information of OS493_019054-T1 in Lophelia pertusa

Genomic Location: scaffold_64:1761290...1777662
NR annotation: KAJ7372545.1, hypothetical protein OS493_019054 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9BV38WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2
Q3SZD4WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1
Q68EI0WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR045227FamilyWD repeat-containing protein WDR18/Ipi3/RID3Interproscan
IPR011047Homologous_superfamilyQuinoprotein alcohol dehydrogenase-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18763WD-REPEAT PROTEIN 18Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005656Cellular Componentnuclear pre-replicative complexInterproscan
GO:0006261Biological ProcessDNA-templated DNA replicationInterproscan
GO:0006364Biological ProcessrRNA processingInterproscan
GO:0097344Cellular Componentobsolete Rix1 complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14829IPI3; pre-rRNA-processing protein IPI3-Ribosome biogenesisko03009deepkoala

Expression pattern
 Expression trend for OS493_019054-T1 global co-expression network
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