Detailed information of OS493_018724-T1 in Lophelia pertusa

Genomic Location: scaffold_62:1679098...1680543
NR annotation: KAJ7385031.1, hypothetical protein OS493_018724 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9PVY8Forkhead box protein C2-B OS=Xenopus laevis OX=8355 GN=foxc2-b PE=2 SV=2
Q6NVT7Forkhead box protein C2 OS=Xenopus tropicalis OX=8364 GN=foxc2 PE=2 SV=2
Q9PVY9Forkhead box protein C2-A OS=Xenopus laevis OX=8355 GN=foxc2-a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00250ForkheadForkhead domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001766DomainFork head domainInterproscan
IPR030456Conserved_siteFork head domain conserved site 2Interproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR050211FamilyForkhead box domain-containing proteinInterproscan
IPR018122Conserved_siteFork head domain conserved site1Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11829FORKHEAD BOX PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0009653Biological Processanatomical structure morphogenesisInterproscan
GO:0030154Biological Processcell differentiationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09396FOXC; forkhead box protein C-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_018724-T1 global co-expression network
TOP