Detailed information of OS493_018703-T1 in Lophelia pertusa

Genomic Location: scaffold_62:1318006...1318962
NR annotation: KAJ7385014.1, Transcriptional repressor scratch 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q99M85Transcriptional repressor scratch 1 OS=Mus musculus OX=10090 GN=Scrt1 PE=1 SV=1
Q9BWW7Transcriptional repressor scratch 1 OS=Homo sapiens OX=9606 GN=SCRT1 PE=1 SV=2
Q9NQ03Transcriptional repressor scratch 2 OS=Homo sapiens OX=9606 GN=SCRT2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050527FamilySnail/Krueppel C2H2-type Zinc-fingerInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24388ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09219SCRT; scratch-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_018703-T1 global co-expression network
TOP