Detailed information of OS493_018531-T1 in Lophelia pertusa

Genomic Location: scaffold_61:1700910...1708320
NR annotation: KAJ7391484.1, Runt- transcription factor [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q01196Runt-related transcription factor 1 OS=Homo sapiens OX=9606 GN=RUNX1 PE=1 SV=3
Q03347Runt-related transcription factor 1 OS=Mus musculus OX=10090 GN=Runx1 PE=1 SV=1
Q63046Runt-related transcription factor 1 OS=Rattus norvegicus OX=10116 GN=Runx1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00853RuntRunt domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000040FamilyAcute myeloid leukemia 1 protein (AML1)/RuntInterproscan
IPR013524DomainRunt domainInterproscan
IPR008967Homologous_superfamilyp53-like transcription factor, DNA-binding domain superfamilyInterproscan
IPR012346Homologous_superfamilyp53/RUNT-type transcription factor, DNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11950RUNT RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08367RUNX1, AML1; runt-related transcription factor 1-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_018531-T1 global co-expression network
TOP