Detailed information of OS493_018443-T1 in Lophelia pertusa

Genomic Location: scaffold_61:756053...756850
NR annotation: KAJ7391399.1, Pituitary-specific positive transcription factor 1 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9YGL7Pituitary-specific positive transcription factor 1 OS=Gallus gallus OX=9031 GN=POU1F1 PE=2 SV=1
Q05749Pituitary-specific positive transcription factor 1 OS=Meleagris gallopavo OX=9103 GN=POU1F1 PE=2 SV=2
P10036Pituitary-specific positive transcription factor 1 OS=Bos taurus OX=9913 GN=POU1F1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00157PouPou domain - N-terminal to homeobox domainDomainInterproscan
PF00046HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000327DomainPOU-specific domainInterproscan
IPR010982Homologous_superfamilyLambda repressor-like, DNA-binding domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR017970Conserved_siteHomeobox, conserved siteInterproscan
IPR050255FamilyPOU domain transcription factorInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR013847DomainPOU domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11636POU DOMAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09363POU1F, PIT1; POU domain transcription factor, class 1-Transcription factorsko03000deepkoala

Expression pattern
 Expression trend for OS493_018443-T1 global co-expression network
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