Detailed information of OS493_018296-T1 in Lophelia pertusa

Genomic Location: scaffold_60:1135082...1149748
NR annotation: KAJ7333121.1, Coatomer subunit delta [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P53619Coatomer subunit delta OS=Bos taurus OX=9913 GN=ARCN1 PE=1 SV=1
Q5RA77Coatomer subunit delta OS=Pongo abelii OX=9601 GN=ARCN1 PE=2 SV=1
P48444Coatomer subunit delta OS=Homo sapiens OX=9606 GN=ARCN1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00928Adap_comp_subAdaptor complexes medium subunit familyFamilyInterproscan
PF01217Clat_adaptor_sClathrin adaptor complex small chainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028565DomainMu homology domainInterproscan
IPR027059FamilyCoatomer delta subunitInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR036168Homologous_superfamilyAP-2 complex subunit mu, C-terminal superfamilyInterproscan
IPR022775DomainAP complex, mu/sigma subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10121COATOMER SUBUNIT DELTAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006888Biological Processendoplasmic reticulum to Golgi vesicle-mediated transportInterproscan
GO:0006890Biological Processretrograde vesicle-mediated transport, Golgi to endoplasmic reticulumInterproscan
GO:0030126Cellular ComponentCOPI vesicle coatInterproscan
GO:0051645Biological ProcessGolgi localizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20471COPD, ARCN1, RET2; coatomer subunit delta-Membrane traffickingko04131deepkoala

Expression pattern
 Expression trend for OS493_018296-T1 global co-expression network
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