Detailed information of OS493_018273-T1 in Lophelia pertusa

Genomic Location: scaffold_60:839789...850445
NR annotation: KAJ7333098.1, hypothetical protein OS493_018273 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9U5L1Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster OX=7227 GN=SrpRalpha PE=1 SV=2
Q9DBG7Signal recognition particle receptor subunit alpha OS=Mus musculus OX=10090 GN=Srpra PE=1 SV=1
P06625Signal recognition particle receptor subunit alpha OS=Canis lupus familiaris OX=9615 GN=SRPRA PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02881SRP54_NSRP54-type protein, helical bundle domainDomainInterproscan
PF04086SRP-alpha_NSignal recognition particle, alpha subunit, N-terminalFamilyInterproscan
PF00448SRP54SRP54-type protein, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036225Homologous_superfamilySRP/SRP receptor, N-terminalInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR000897DomainSignal recognition particle, SRP54 subunit, GTPase domainInterproscan
IPR013822DomainSignal recognition particle SRP54, helical bundleInterproscan
IPR007222DomainSignal recognition particle receptor, alpha subunit, N-terminalInterproscan
IPR011012Homologous_superfamilyLongin-like domain superfamilyInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR042101Homologous_superfamilySignal recognition particle SRP54, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43134SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005047Molecular Functionsignal recognition particle bindingInterproscan
GO:0005785Cellular Componentsignal recognition particle receptor complexInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0006605Biological Processprotein targetingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0045047Biological Processprotein targeting to ERInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13431SRPR; signal recognition particle receptor subunit alpha-Secretion systemko02044deepkoala

Expression pattern
 Expression trend for OS493_018273-T1 global co-expression network
TOP