Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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Genomic Location: scaffold_60:7671...13975
NR annotation: KAJ7333031.1, hypothetical protein OS493_018200 [Desmophyllum pertusum]
| CDS |
| OS493_018200-T1 |
| Transcript |
| OS493_018200-T1 |
| Protein |
| OS493_018200-T1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00096 | zf-C2H2 | Zinc finger, C2H2 type | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR013087 | Domain | Zinc finger C2H2-type | Interproscan |
| IPR036236 | Homologous_superfamily | Zinc finger C2H2 superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24399 | ZINC FINGER AND BTB DOMAIN-CONTAINING | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000978 | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0001227 | Molecular Function | DNA-binding transcription repressor activity, RNA polymerase II-specific | Interproscan |
| GO:0005654 | Cellular Component | nucleoplasm | Interproscan |
| GO:0006357 | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K09228 | KRAB; KRAB domain-containing zinc finger protein | - | Transcription factors | ko03000 | deepkoala |
| Expression trend for OS493_018200-T1 global co-expression network |