Detailed information of OS493_018009-T1 in Lophelia pertusa

Genomic Location: scaffold_58:1637983...1643939
NR annotation: KAJ7372734.1, WD repeat domain phosphoinositide-interacting protein 3 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZL16WD repeat domain phosphoinositide-interacting protein 3 OS=Gallus gallus OX=9031 GN=WDR45B PE=2 SV=1
Q5MNZ6WD repeat domain phosphoinositide-interacting protein 3 OS=Homo sapiens OX=9606 GN=WDR45B PE=1 SV=2
Q9CR39WD repeat domain phosphoinositide-interacting protein 3 OS=Mus musculus OX=10090 GN=Wdr45b PE=1 SV=2
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21032PROPPINPROPPINRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048720FamilyPROPPINInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11227WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006497Biological Processprotein lipidationInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0034045Cellular Componentphagophore assembly site membraneInterproscan
GO:0034497Biological Processprotein localization to phagophore assembly siteInterproscan
GO:0044804Biological ProcessnucleophagyInterproscan
GO:0080025Molecular Functionphosphatidylinositol-3,5-bisphosphate bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00826E2.6.1.42, ilvE; branched-chain amino acid aminotransferaseEC:2.6.1.42
Amino acid related enzymesko01007deepkoala

Expression pattern
 Expression trend for OS493_018009-T1 global co-expression network
TOP