Gene detail

Detailed information of OS493_017989-T1 in Lophelia pertusa

Genomic Location: scaffold_58:1512157...1513648
NR annotation: KAJ7372715.1, hypothetical protein OS493_017989 [Desmophyllum pertusum]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q3MHZ2	SPRY domain-containing SOCS box protein 3 OS=Bos taurus OX=9913 GN=SPSB3 PE=2 SV=1
Q6PJ21	SPRY domain-containing SOCS box protein 3 OS=Homo sapiens OX=9606 GN=SPSB3 PE=1 SV=2
Q571F5	SPRY domain-containing SOCS box protein 3 OS=Mus musculus OX=10090 GN=Spsb3 PE=2 SV=2

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|SOCS

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07525	SOCS_box	SOCS box	Domain	Interproscan
PF00622	SPRY	SPRY domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050672	Family	F-box/SPRY and SOCS box protein families	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR035754	Domain	SPRY domain-containing SOCS box protein 3, SPRY domain	Interproscan
IPR003877	Domain	SPRY domain	Interproscan
IPR001870	Domain	B30.2/SPRY domain	Interproscan
IPR043136	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR001496	Domain	SOCS box domain	Interproscan
IPR036036	Homologous_superfamily	SOCS box-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12245	SPRY DOMAIN CONTAINING SOCS BOX PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0019005	Cellular Component	SCF ubiquitin ligase complex	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0035556	Biological Process	intracellular signal transduction	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10345	SPSB3, SSB3; SPRY domain-containing SOCS box protein 3	-	Ubiquitin system	ko04121	deepkoala

Expression pattern