Detailed information of OS493_017989-T1 in Lophelia pertusa Gene info
Gene IDAnnotationScaffoldStartEndStrand
OS493_017989-T1SPRY DOMAIN CONTAINING SOCS BOX PROTEINscaffold_5815121571513648-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|SOCS

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00622SPRYSPRY domainFamilyInterproscan
PF07525SOCS_boxSOCS boxDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001496DomainSOCS box domainInterproscan
IPR001870DomainB30.2/SPRY domainInterproscan
IPR003877DomainSPRY domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR035754DomainSPRY domain-containing SOCS box protein 3, SPRY domainInterproscan
IPR036036Homologous_superfamilySOCS box-like domain superfamilyInterproscan
IPR043136Homologous_superfamilyB30.2/SPRY domain superfamilyInterproscan
IPR050672FamilyF-box/SPRY and SOCS box protein familiesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR12245SPRY DOMAIN CONTAINING SOCS BOX PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0019005Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:0035556Biological Processintracellular signal transductionInterproscan
GO:0043161Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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Expression pattern
 1. Expression trend for OS493_017989-T1 global RNA-seq network
TOP