Detailed information of OS493_017818-T1 in Lophelia pertusa

Genomic Location: scaffold_57:2124806...2129840
NR annotation: KAJ7379305.1, WD repeat domain phosphoinositide-interacting protein 4 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6DCV0WD repeat domain phosphoinositide-interacting protein 4 OS=Xenopus laevis OX=8355 GN=wdr45 PE=2 SV=1
Q7ZUX3WD repeat domain phosphoinositide-interacting protein 4 OS=Danio rerio OX=7955 GN=wdr45 PE=2 SV=1
Q9Y484WD repeat domain phosphoinositide-interacting protein 4 OS=Homo sapiens OX=9606 GN=WDR45 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21032PROPPINPROPPINRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048720FamilyPROPPINInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11227WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000422Biological Processautophagy of mitochondrionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006497Biological Processprotein lipidationInterproscan
GO:0019898Cellular Componentextrinsic component of membraneInterproscan
GO:0032266Molecular Functionphosphatidylinositol-3-phosphate bindingInterproscan
GO:0034045Cellular Componentphagophore assembly site membraneInterproscan
GO:0034497Biological Processprotein localization to phagophore assembly siteInterproscan
GO:0044804Biological ProcessnucleophagyInterproscan
GO:0080025Molecular Functionphosphatidylinositol-3,5-bisphosphate bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K22991WDR45, WIPI4, WIPI3; WD repeat-containing protein 45-Membrane traffickingko04131deepkoala

Expression pattern
 Expression trend for OS493_017818-T1 global co-expression network
TOP