Detailed information of OS493_017786-T1 in Lophelia pertusa

Genomic Location: scaffold_57:1847509...1853061
NR annotation: KAJ7379273.1, hypothetical protein OS493_017786 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZL33Serine-threonine kinase receptor-associated protein OS=Gallus gallus OX=9031 GN=STRAP PE=2 SV=2
Q9Z1Z2Serine-threonine kinase receptor-associated protein OS=Mus musculus OX=10090 GN=Strap PE=1 SV=2
Q9Y3F4Serine-threonine kinase receptor-associated protein OS=Homo sapiens OX=9606 GN=STRAP PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19877EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT IInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000387Biological Processspliceosomal snRNP assemblyInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0032797Cellular ComponentSMN complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13137STRAP, UNRIP; serine-threonine kinase receptor-associated protein-Spliceosomeko03041deepkoala

Expression pattern
 Expression trend for OS493_017786-T1 global co-expression network
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