| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| OS493_017704-T1 | UNCHARACTERIZED | scaffold_57 | 1103611 | 1112944 | + |
| CDS | |||||
| OS493_017704-T1 | |||||
| Transcript |
| OS493_017704-T1 |
| Protein |
| OS493_017704-T1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF08424 | NRDE-2 | NRDE-2, necessary for RNA interference | Family | Interproscan |
| PF10650 | zf-C3H1 | Putative zinc-finger domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000571 | Domain | Zinc finger, CCCH-type | Interproscan |
| IPR003107 | Repeat | HAT (Half-A-TPR) repeat | Interproscan |
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR013633 | Family | siRNA-mediated silencing protein NRDE-2 | Interproscan |
| IPR019607 | Domain | Putative zinc-finger domain | Interproscan |
| IPR039278 | Family | NURS complex subunit red1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21563 | UNCHARACTERIZED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000178 | Cellular Component | exosome (RNase complex) | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
| 1. Expression trend for OS493_017704-T1 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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