Detailed information of OS493_017704-T1 in Lophelia pertusa

Genomic Location: scaffold_57:1103611...1112944
NR annotation: KAJ7379200.1, hypothetical protein OS493_017704 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O60293Zinc finger C3H1 domain-containing protein OS=Homo sapiens OX=9606 GN=ZFC3H1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08424NRDE-2NRDE-2, necessary for RNA interferenceFamilyInterproscan
PF10650zf-C3H1Putative zinc-finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013633FamilysiRNA-mediated silencing protein NRDE-2Interproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR039278FamilyNURS complex subunit red1Interproscan
IPR019607DomainPutative zinc-finger domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21563UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0000178Cellular Componentexosome (RNase complex)Interproscan
GO:0005634Cellular ComponentnucleusInterproscan

Expression pattern
 Expression trend for OS493_017704-T1 global co-expression network
TOP