Detailed information of OS493_017589-T1 in Lophelia pertusa

Genomic Location: scaffold_56:2131633...2142397
NR annotation: KAJ7385210.1, WD repeat-containing protein 82 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZMV7WD repeat-containing protein 82 OS=Gallus gallus OX=9031 GN=WDR82 PE=2 SV=1
Q6UXN9WD repeat-containing protein 82 OS=Homo sapiens OX=9606 GN=WDR82 PE=1 SV=1
Q8BFQ4WD repeat-containing protein 82 OS=Mus musculus OX=10090 GN=Wdr82 PE=1 SV=1
 Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR037867FamilyCOMPASS component Swd2/WDR82Interproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19861WD40 REPEAT PROTEIN SWD2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0048188Cellular ComponentSet1C/COMPASS complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14962WDR82, SWD2, CPS35; COMPASS component SWD2-Chromosome and associated proteinsko03036deepkoala

Expression pattern
 Expression trend for OS493_017589-T1 global co-expression network
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